STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001420915_03579Unannotated protein. (259 aa)    
Predicted Functional Partners:
GCA_001420915_03580
Unannotated protein.
 
  
 0.958
GCA_001420915_02861
Unannotated protein.
  
  
 0.955
GCA_001420915_03464
Unannotated protein.
  
 
 0.947
GCA_001420915_02141
Unannotated protein.
   
 0.929
GCA_001420915_03577
Unannotated protein.
   
 0.918
GCA_001420915_01298
Unannotated protein.
  
  
  0.913
GCA_001420915_03065
Unannotated protein.
 
  
  0.906
GCA_001420915_00712
Unannotated protein.
     
 0.894
GCA_001420915_00181
Unannotated protein.
    
  0.893
GCA_001420915_03266
Unannotated protein.
  
 
 0.877
Your Current Organism:
Agarivorans gilvus
NCBI taxonomy Id: 680279
Other names: A. gilvus, Agarivorans gilvus Du et al. 2011, Agarivorans sp. WH0801, CGMCC 1.10131, NRRL B-59247, strain WH0801
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.