STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_09903Unannotated protein. (377 aa)    
Predicted Functional Partners:
GCA_001553435_00321
Unannotated protein.
 
 
 0.990
SHXM_08364
Unannotated protein.
 
 
 0.990
SHXM_00921
Unannotated protein.
 
 
 0.968
ssuB-2
Unannotated protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.962
ssuB
Unannotated protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 
 0.961
SHXM_00667
Unannotated protein.
 
 
 0.958
SHXM_04533
Unannotated protein.
 
 
 0.943
SHXM_07583
Unannotated protein.
 
 
 0.935
SHXM_00922
Unannotated protein.
 
 
 0.926
SHXM_02667
Unannotated protein.
 
 
  0.925
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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