STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001553435_00325Unannotated protein. (194 aa)    
Predicted Functional Partners:
GCA_001553435_00324
Unannotated protein.
 
   
 0.894
GCA_001553435_06233
Unannotated protein.
  
     0.615
SHXM_02860
Unannotated protein.
  
     0.505
GCA_001553435_08271
Unannotated protein.
  
     0.491
SHXM_01707
Unannotated protein.
       0.465
SHXM_02354
Unannotated protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
     0.419
GCA_001553435_04921
Unannotated protein.
 
     0.405
SHXM_01190
Unannotated protein.
  
     0.403
SHXM_02493
Unannotated protein.
  
     0.402
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.