STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_02114Unannotated protein. (153 aa)    
Predicted Functional Partners:
SHXM_06782
Unannotated protein; Belongs to the anti-sigma-factor antagonist family.
  
  0.841
GCA_001553435_04271
Unannotated protein.
  
  0.830
GCA_001553435_03281
Unannotated protein.
  
   0.793
SHXM_04992
Unannotated protein; Belongs to the anti-sigma-factor antagonist family.
  
  0.783
GCA_001553435_06653
Unannotated protein.
  
     0.771
SHXM_05143
Unannotated protein.
  
   0.768
GCA_001553435_07777
Unannotated protein.
  
     0.757
SHXM_04537
Unannotated protein.
  
     0.756
SHXM_06783
Unannotated protein; Belongs to the anti-sigma-factor antagonist family.
  
  0.754
GCA_001553435_02478
Unannotated protein.
  
  0.751
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.