STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_06220Unannotated protein. (260 aa)    
Predicted Functional Partners:
GCA_001553435_03235
Unannotated protein.
  
 0.932
SHXM_08406
Unannotated protein.
  
 0.839
GCA_001553435_06912
Unannotated protein.
  
  
 
0.819
SHXM_06219
Unannotated protein.
       0.778
GCA_001553435_01592
Unannotated protein.
  
 0.778
GCA_001553435_03237
Unannotated protein.
  
 0.775
SHXM_08906
Unannotated protein.
  
 0.775
GCA_001553435_08005
Unannotated protein.
  
 0.766
GCA_001553435_08035
Unannotated protein.
  
 0.766
GCA_001553435_03809
Unannotated protein.
  
 0.757
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.