STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_07501Unannotated protein. (702 aa)    
Predicted Functional Partners:
SHXM_03621
Unannotated protein.
   
 
 0.919
SHXM_03634
Unannotated protein.
 
 
 0.902
GCA_001553435_01239
Unannotated protein.
   
 
 0.901
SHXM_04923
Unannotated protein.
   
 
 0.883
SHXM_04244
Unannotated protein.
 
 
 0.872
SHXM_02231
Unannotated protein.
 
 
 0.849
GCA_001553435_02925
Unannotated protein.
    
 
 0.847
SHXM_06381
Unannotated protein.
 
 
 0.845
SHXM_05524
Unannotated protein.
 
 
0.800
SHXM_06562
Unannotated protein.
  
  
 
0.794
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.