STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_05522Unannotated protein. (249 aa)    
Predicted Functional Partners:
SHXM_05519
Unannotated protein.
 
   
 0.921
GCA_001553435_02177
Unannotated protein.
 
    
0.849
SHXM_05520
Unannotated protein.
       0.831
SHXM_05518
Unannotated protein.
 
   
0.800
SHXM_05517
Unannotated protein.
       0.719
crgA
Unannotated protein; Involved in cell division; Belongs to the CrgA family.
       0.675
SHXM_02434
Unannotated protein.
  
     0.629
SHXM_03107
Unannotated protein.
  
     0.622
SHXM_05875
Unannotated protein.
  
     0.496
SHXM_04552
Unannotated protein.
      
 0.493
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.