STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_00804Unannotated protein. (71 aa)    
Predicted Functional Partners:
SHXM_00805
Unannotated protein; Belongs to the cytochrome P450 family.
  
    0.775
SHXM_06035
Unannotated protein.
    
 0.768
SHXM_06952
Unannotated protein; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.697
GCA_001553435_02078
Unannotated protein.
 
     0.682
GCA_001553435_03748
Unannotated protein.
 
     0.651
SHXM_00806
Unannotated protein.
 
     0.645
SHXM_00562
Unannotated protein.
  
     0.624
SHXM_06243
Unannotated protein.
  
     0.611
GCA_001553435_05318
Unannotated protein.
 
     0.608
SHXM_01431
Unannotated protein.
  
  
  0.603
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.