Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001553435_04474 | GCA_001553435_04475 | GCA_001553435_04474 | GCA_001553435_04475 | Unannotated protein. | Unannotated protein. | 0.808 |
GCA_001553435_04474 | SHXM_03123 | GCA_001553435_04474 | GCA_001553435_01522 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.727 |
GCA_001553435_04474 | SHXM_04572 | GCA_001553435_04474 | GCA_001553435_04477 | Unannotated protein. | Unannotated protein. | 0.451 |
GCA_001553435_04474 | SHXM_04573 | GCA_001553435_04474 | GCA_001553435_04476 | Unannotated protein. | Unannotated protein. | 0.718 |
GCA_001553435_04475 | GCA_001553435_04474 | GCA_001553435_04475 | GCA_001553435_04474 | Unannotated protein. | Unannotated protein. | 0.808 |
GCA_001553435_04475 | SHXM_03123 | GCA_001553435_04475 | GCA_001553435_01522 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.727 |
GCA_001553435_04475 | SHXM_04572 | GCA_001553435_04475 | GCA_001553435_04477 | Unannotated protein. | Unannotated protein. | 0.564 |
GCA_001553435_04475 | SHXM_04573 | GCA_001553435_04475 | GCA_001553435_04476 | Unannotated protein. | Unannotated protein. | 0.646 |
SHXM_03123 | GCA_001553435_04474 | GCA_001553435_01522 | GCA_001553435_04474 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.727 |
SHXM_03123 | GCA_001553435_04475 | GCA_001553435_01522 | GCA_001553435_04475 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.727 |
SHXM_03123 | SHXM_04011 | GCA_001553435_01522 | GCA_001553435_05013 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.746 |
SHXM_03123 | SHXM_04573 | GCA_001553435_01522 | GCA_001553435_04476 | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Unannotated protein. | 0.788 |
SHXM_04011 | SHXM_03123 | GCA_001553435_05013 | GCA_001553435_01522 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.746 |
SHXM_04011 | SHXM_04571 | GCA_001553435_05013 | GCA_001553435_04478 | Unannotated protein. | Unannotated protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family. | 0.407 |
SHXM_04011 | SHXM_04573 | GCA_001553435_05013 | GCA_001553435_04476 | Unannotated protein. | Unannotated protein. | 0.651 |
SHXM_04554 | SHXM_04573 | GCA_001553435_04495 | GCA_001553435_04476 | Unannotated protein. | Unannotated protein. | 0.568 |
SHXM_04571 | SHXM_04011 | GCA_001553435_04478 | GCA_001553435_05013 | Unannotated protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family. | Unannotated protein. | 0.407 |
SHXM_04571 | SHXM_04572 | GCA_001553435_04478 | GCA_001553435_04477 | Unannotated protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family. | Unannotated protein. | 0.565 |
SHXM_04571 | SHXM_04573 | GCA_001553435_04478 | GCA_001553435_04476 | Unannotated protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family. | Unannotated protein. | 0.589 |
SHXM_04571 | SHXM_05989 | GCA_001553435_04478 | GCA_001553435_03898 | Unannotated protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family. | Unannotated protein. | 0.597 |
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