Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHXM_01208 | SHXM_01388 | GCA_001553435_07385 | GCA_001553435_00077 | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Unannotated protein. | 0.936 |
SHXM_01208 | SHXM_02401 | GCA_001553435_07385 | GCA_001553435_02643 | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | 0.971 |
SHXM_01208 | SHXM_03486 | GCA_001553435_07385 | GCA_001553435_03394 | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Unannotated protein; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.946 |
SHXM_01208 | SHXM_04260 | GCA_001553435_07385 | GCA_001553435_02873 | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Unannotated protein. | 0.915 |
SHXM_01208 | SHXM_05502 | GCA_001553435_07385 | GCA_001553435_02199 | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Unannotated protein. | 0.911 |
SHXM_01208 | SHXM_08154 | GCA_001553435_07385 | GCA_001553435_04743 | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Unannotated protein. | 0.910 |
SHXM_01208 | prs | GCA_001553435_07385 | GCA_001553435_01402 | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.425 |
SHXM_01388 | SHXM_01208 | GCA_001553435_00077 | GCA_001553435_07385 | Unannotated protein. | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.936 |
SHXM_01388 | SHXM_02401 | GCA_001553435_00077 | GCA_001553435_02643 | Unannotated protein. | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | 0.992 |
SHXM_01388 | SHXM_03084 | GCA_001553435_00077 | GCA_001553435_01560 | Unannotated protein. | Unannotated protein. | 0.908 |
SHXM_01388 | SHXM_03085 | GCA_001553435_00077 | GCA_001553435_01559 | Unannotated protein. | Unannotated protein. | 0.922 |
SHXM_01388 | SHXM_04260 | GCA_001553435_00077 | GCA_001553435_02873 | Unannotated protein. | Unannotated protein. | 0.956 |
SHXM_01388 | SHXM_08154 | GCA_001553435_00077 | GCA_001553435_04743 | Unannotated protein. | Unannotated protein. | 0.938 |
SHXM_01388 | prs | GCA_001553435_00077 | GCA_001553435_01402 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.955 |
SHXM_01388 | rbsK | GCA_001553435_00077 | GCA_001553435_06289 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.910 |
SHXM_02401 | SHXM_01208 | GCA_001553435_02643 | GCA_001553435_07385 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.971 |
SHXM_02401 | SHXM_01388 | GCA_001553435_02643 | GCA_001553435_00077 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.992 |
SHXM_02401 | SHXM_03084 | GCA_001553435_02643 | GCA_001553435_01560 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.975 |
SHXM_02401 | SHXM_03085 | GCA_001553435_02643 | GCA_001553435_01559 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein. | 0.963 |
SHXM_02401 | SHXM_03486 | GCA_001553435_02643 | GCA_001553435_03394 | Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. | Unannotated protein; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.989 |
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