STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001553435_04917Unannotated protein. (127 aa)    
Predicted Functional Partners:
SHXM_04106
Unannotated protein.
 
     0.692
SHXM_09137
Unannotated protein.
  
     0.686
SHXM_08135
Unannotated protein; Belongs to the major facilitator superfamily.
  
     0.684
SHXM_07432
Unannotated protein.
  
     0.679
SHXM_05317
Unannotated protein.
  
     0.662
SHXM_08425
Unannotated protein.
  
     0.649
SHXM_05419
Unannotated protein; Belongs to the major facilitator superfamily.
  
     0.638
GCA_001553435_01071
Unannotated protein.
  
     0.635
GCA_001553435_03145
Unannotated protein.
  
     0.633
SHXM_09790
Unannotated protein.
  
     0.622
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.