STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_05144Unannotated protein. (248 aa)    
Predicted Functional Partners:
GCA_001553435_05201
Unannotated protein.
 
    
0.808
GCA_001553435_05894
Unannotated protein.
  
     0.614
GCA_001553435_00932
Unannotated protein.
  
     0.599
SHXM_01638
Unannotated protein.
  
     0.548
GCA_001553435_00929
Unannotated protein.
  
     0.528
GCA_001553435_05912
Unannotated protein.
  
     0.524
GCA_001553435_00930
Unannotated protein.
  
     0.514
SHXM_02621
Unannotated protein.
  
   
 0.508
GCA_001553435_06036
Unannotated protein.
  
     0.494
SHXM_04145
Unannotated protein.
  
     0.474
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.