STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_07118Unannotated protein. (255 aa)    
Predicted Functional Partners:
gpsA
Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.984
SHXM_07177
Unannotated protein; Belongs to the CDS family.
    
 0.885
ddl
Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
       0.839
GCA_001553435_08349
Unannotated protein.
    
 0.827
SHXM_07028
Unannotated protein.
    
 0.797
fbiD
Unannotated protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor.
       0.784
SHXM_03321
Unannotated protein.
  
  
 
0.779
SHXM_02509
Unannotated protein.
  
  
 
0.762
SHXM_03669
Unannotated protein.
  
  
 
0.762
GCA_001553435_08288
Unannotated protein.
  
 0.761
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.