Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001553435_02554 | SHXM_07088 | GCA_001553435_02554 | GCA_001553435_05268 | Unannotated protein. | Unannotated protein. | 0.556 |
SHXM_00561 | SHXM_06838 | GCA_001553435_05007 | GCA_001553435_00911 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.477 |
SHXM_00561 | SHXM_07088 | GCA_001553435_05007 | GCA_001553435_05268 | Unannotated protein. | Unannotated protein. | 0.422 |
SHXM_02652 | SHXM_07088 | GCA_001553435_07178 | GCA_001553435_05268 | Unannotated protein. | Unannotated protein. | 0.419 |
SHXM_02806 | SHXM_07080 | GCA_001553435_06026 | GCA_001553435_05274 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.658 |
SHXM_02806 | SHXM_07088 | GCA_001553435_06026 | GCA_001553435_05268 | Unannotated protein. | Unannotated protein. | 0.436 |
SHXM_04179 | SHXM_06838 | GCA_001553435_06920 | GCA_001553435_00911 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.410 |
SHXM_04179 | SHXM_07088 | GCA_001553435_06920 | GCA_001553435_05268 | Unannotated protein. | Unannotated protein. | 0.415 |
SHXM_06838 | SHXM_00561 | GCA_001553435_00911 | GCA_001553435_05007 | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | Unannotated protein. | 0.477 |
SHXM_06838 | SHXM_04179 | GCA_001553435_00911 | GCA_001553435_06920 | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | Unannotated protein. | 0.410 |
SHXM_06838 | SHXM_07088 | GCA_001553435_00911 | GCA_001553435_05268 | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | Unannotated protein. | 0.407 |
SHXM_07080 | SHXM_02806 | GCA_001553435_05274 | GCA_001553435_06026 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.658 |
SHXM_07080 | SHXM_07088 | GCA_001553435_05274 | GCA_001553435_05268 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.565 |
SHXM_07087 | SHXM_07088 | GCA_001553435_05269 | GCA_001553435_05268 | Unannotated protein. | Unannotated protein. | 0.595 |
SHXM_07088 | GCA_001553435_02554 | GCA_001553435_05268 | GCA_001553435_02554 | Unannotated protein. | Unannotated protein. | 0.556 |
SHXM_07088 | SHXM_00561 | GCA_001553435_05268 | GCA_001553435_05007 | Unannotated protein. | Unannotated protein. | 0.422 |
SHXM_07088 | SHXM_02652 | GCA_001553435_05268 | GCA_001553435_07178 | Unannotated protein. | Unannotated protein. | 0.419 |
SHXM_07088 | SHXM_02806 | GCA_001553435_05268 | GCA_001553435_06026 | Unannotated protein. | Unannotated protein. | 0.436 |
SHXM_07088 | SHXM_04179 | GCA_001553435_05268 | GCA_001553435_06920 | Unannotated protein. | Unannotated protein. | 0.415 |
SHXM_07088 | SHXM_06838 | GCA_001553435_05268 | GCA_001553435_00911 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.407 |
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