STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_07044Unannotated protein. (348 aa)    
Predicted Functional Partners:
GCA_001553435_08141
Unannotated protein.
 
 0.978
SHXM_07045
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 
  0.977
SHXM_07043
Unannotated protein.
 
 0.971
GCA_001553435_08142
Unannotated protein.
 
 
 0.970
SHXM_07046
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 0.965
SHXM_07042
Unannotated protein.
 
 0.959
SHXM_06638
Unannotated protein.
 
 0.939
SHXM_01609
Unannotated protein.
 
 0.933
SHXM_06637
Unannotated protein.
 
 0.928
SHXM_06616
Unannotated protein.
 
 0.909
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.