STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_08968Unannotated protein. (220 aa)    
Predicted Functional Partners:
SHXM_08967
Unannotated protein.
 
     0.662
SHXM_08966
Unannotated protein.
 
     0.587
SHXM_01480
Unannotated protein.
       0.565
SHXM_04365
Unannotated protein.
       0.565
SHXM_08965
Unannotated protein.
       0.490
SHXM_09639
Unannotated protein.
  
     0.469
SHXM_03225
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.403
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.