STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_04360Unannotated protein. (306 aa)    
Predicted Functional Partners:
SHXM_04353
Unannotated protein; Belongs to the TPP enzyme family.
 
 
 0.998
iolG
Unannotated protein; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
 
  0.998
SHXM_04354
Unannotated protein.
 
  
 0.968
SHXM_04356
Unannotated protein.
 
 
  0.957
SHXM_04558
Unannotated protein.
 
 
  0.948
SHXM_00887
Unannotated protein.
 
 
  0.942
SHXM_04355
Unannotated protein.
 
     0.919
GCA_001553435_01723
Unannotated protein.
 
 
  0.912
SHXM_07660
Unannotated protein.
 
    0.853
SHXM_07659
Unannotated protein.
 
  
 0.846
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.