STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001553435_06337Unannotated protein. (198 aa)    
Predicted Functional Partners:
GCA_001553435_00646
Unannotated protein.
  
 
 0.918
SHXM_03123
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.843
tdk
Unannotated protein.
  
 
 0.609
SHXM_08906
Unannotated protein.
    
 0.606
GCA_001553435_07995
Unannotated protein.
  
 
 0.590
GCA_001553435_08355
Unannotated protein.
  
 
 0.590
SHXM_08800
Unannotated protein.
 
     0.588
SHXM_08406
Unannotated protein.
  
 
 0.578
GCA_001553435_07419
Unannotated protein.
  
 
 0.574
GCA_001553435_08012
Unannotated protein.
  
 
 0.574
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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