Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHXM_00507 | SHXM_00509 | GCA_001553435_06880 | GCA_001553435_06879 | Unannotated protein. | Unannotated protein. | 0.603 |
SHXM_00507 | SHXM_03568 | GCA_001553435_06880 | GCA_001553435_07693 | Unannotated protein. | Unannotated protein. | 0.747 |
SHXM_00507 | SHXM_06035 | GCA_001553435_06880 | GCA_001553435_03860 | Unannotated protein. | Unannotated protein. | 0.699 |
SHXM_00509 | SHXM_00507 | GCA_001553435_06879 | GCA_001553435_06880 | Unannotated protein. | Unannotated protein. | 0.603 |
SHXM_00509 | SHXM_00510 | GCA_001553435_06879 | GCA_001553435_06878 | Unannotated protein. | Unannotated protein. | 0.531 |
SHXM_00509 | SHXM_03404 | GCA_001553435_06879 | GCA_001553435_03313 | Unannotated protein. | Unannotated protein. | 0.613 |
SHXM_00509 | SHXM_03568 | GCA_001553435_06879 | GCA_001553435_07693 | Unannotated protein. | Unannotated protein. | 0.718 |
SHXM_00509 | SHXM_04547 | GCA_001553435_06879 | GCA_001553435_04501 | Unannotated protein. | Unannotated protein. | 0.519 |
SHXM_00509 | SHXM_06035 | GCA_001553435_06879 | GCA_001553435_03860 | Unannotated protein. | Unannotated protein. | 0.684 |
SHXM_00509 | SHXM_07269 | GCA_001553435_06879 | GCA_001553435_03462 | Unannotated protein. | Unannotated protein. | 0.837 |
SHXM_00509 | ribBA | GCA_001553435_06879 | GCA_001553435_02624 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.658 |
SHXM_00509 | rpoA | GCA_001553435_06879 | GCA_001553435_01115 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.666 |
SHXM_00509 | rpoB | GCA_001553435_06879 | GCA_001553435_03819 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.523 |
SHXM_00510 | SHXM_00509 | GCA_001553435_06878 | GCA_001553435_06879 | Unannotated protein. | Unannotated protein. | 0.531 |
SHXM_03404 | SHXM_00509 | GCA_001553435_03313 | GCA_001553435_06879 | Unannotated protein. | Unannotated protein. | 0.613 |
SHXM_03404 | SHXM_03568 | GCA_001553435_03313 | GCA_001553435_07693 | Unannotated protein. | Unannotated protein. | 0.877 |
SHXM_03404 | SHXM_07269 | GCA_001553435_03313 | GCA_001553435_03462 | Unannotated protein. | Unannotated protein. | 0.999 |
SHXM_03404 | ribBA | GCA_001553435_03313 | GCA_001553435_02624 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.946 |
SHXM_03404 | rpoB | GCA_001553435_03313 | GCA_001553435_03819 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.590 |
SHXM_03568 | SHXM_00507 | GCA_001553435_07693 | GCA_001553435_06880 | Unannotated protein. | Unannotated protein. | 0.747 |
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