STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001553435_06953Unannotated protein. (291 aa)    
Predicted Functional Partners:
SHXM_02619
Unannotated protein.
 
     0.790
SHXM_04745
Unannotated protein.
 
  
 0.753
SHXM_06891
Unannotated protein.
  
 
 0.752
GCA_001553435_06954
Unannotated protein.
       0.604
SHXM_02617
Unannotated protein.
 
  
 0.568
SHXM_08616
Unannotated protein.
 
 
 0.563
SHXM_06339
Unannotated protein.
 
  
 0.491
SHXM_08376
Unannotated protein.
  
     0.468
SHXM_06570
Unannotated protein.
    
 0.463
SHXM_04254
Unannotated protein.
 
    0.454
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.