STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_03735Unannotated protein. (469 aa)    
Predicted Functional Partners:
SHXM_03568
Unannotated protein.
  
 
 0.987
SHXM_04052
Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.968
SHXM_02914
Unannotated protein.
     
 0.966
SHXM_05330
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.951
SHXM_04703
Unannotated protein.
     
 0.950
gcvP
Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.944
SHXM_08830
Unannotated protein.
  
 
 0.940
SHXM_03567
Unannotated protein.
  
 
 0.940
SHXM_04053
Unannotated protein.
     
 0.933
SHXM_06443
Unannotated protein.
     
 0.932
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.