STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHXM_04699Unannotated protein. (760 aa)    
Predicted Functional Partners:
SHXM_02621
Unannotated protein.
 
  
 0.748
GCA_001553435_05884
Unannotated protein.
  
     0.638
SHXM_02571
Unannotated protein.
  
     0.608
GCA_001553435_02310
Unannotated protein.
  
     0.606
SHXM_04700
Unannotated protein.
 
  
 0.603
SHXM_04254
Unannotated protein.
 
     0.584
SHXM_05337
Unannotated protein.
 
     0.583
SHXM_05684
Unannotated protein.
  
    0.576
SHXM_00680
Unannotated protein.
 
     0.561
SHXM_07233
Unannotated protein.
  
     0.553
Your Current Organism:
Streptomyces hygroscopicus
NCBI taxonomy Id: 68042
Other names: S. hygroscopicus subsp. hygroscopicus, Streptomyces hygroscopicus subsp. hygroscopicus
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.