Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
KLR59143.1Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)    
Predicted Functional Partners:
KLR59144.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.945
KLR59145.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.861
KLR59131.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
KLR59133.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
KLR59134.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
KLR59135.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
KLR59136.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
KLR59137.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.813
KLR59129.1
Raqprd family integrative conjugative element protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
KLR57358.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.784
Your Current Organism:
Diaphorobacter sp. J551
NCBI taxonomy Id: 680496
Other names: D. sp. J5-51, Diaphorobacter sp. J5-51
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