Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KLR58372.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)    
Predicted Functional Partners:
KLR57485.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
KLR58393.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
KLR58030.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
KLR57480.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
KLR58377.1
Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.490
KLR58394.1
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.484
pyrL
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.477
KLR57025.1
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.454
KLR58373.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.438
pyrO
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.431
Your Current Organism:
Diaphorobacter sp. J551
NCBI taxonomy Id: 680496
Other names: D. sp. J5-51, Diaphorobacter sp. J5-51
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