STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KLR58377.1Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)    
Predicted Functional Partners:
pyrO
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.963
KLR58376.1
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.963
pyrN
Phenol 2-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.962
pyrL
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.955
KLR58373.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.955
KLR58396.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.940
KLR58394.1
Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.939
pyrF-2
2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.894
KLR58028.1
4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.
 
  
 0.849
KLR58672.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.835
Your Current Organism:
Diaphorobacter sp. J551
NCBI taxonomy Id: 680496
Other names: D. sp. J5-51, Diaphorobacter sp. J5-51
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