STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI65010.1Predicted ATPase with chaperone activity. (512 aa)    
Predicted Functional Partners:
BAI65009.1
Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
 0.937
BAI65011.1
Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.
 
    0.892
xerC
Integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.616
BAI65012.1
Signal transduction histidine kinase.
       0.545
BAI64838.1
Predicted membrane metal-binding protein.
 
  
 0.513
BAI65013.1
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.468
nnrD
Predicted sugar kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
 
     0.453
Your Current Organism:
Rothia mucilaginosa
NCBI taxonomy Id: 680646
Other names: R. mucilaginosa DY-18, Rothia mucilaginosa DY-18, Rothia mucilaginosa str. DY-18, Rothia mucilaginosa strain DY-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.