STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT61542.1acyl-CoA hydrolase. (436 aa)    
Predicted Functional Partners:
GAT62654.1
methylmalonyl-CoA mutase.
  
 
 0.889
GAT62656.1
methylmalonyl-CoA mutase.
  
 
 0.889
GAT61910.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.835
GAT61594.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.779
GAT61593.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.774
PJIAN_215
acetyl-CoA synthetase.
  
 0.706
PJIAN_450
Acyl dehydratase.
  
 
 0.685
GAT62218.1
Alcohol dehydrogenase, class IV.
  
 
 0.643
GAT63870.1
Malate dehydrogenase.
  
 0.643
GAT62557.1
RHH-type transcriptional regulator; Belongs to the aldehyde dehydrogenase family.
  
 
 0.627
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.