STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT61789.1ABC-type nitrate/sulfonate/bicarbonate transport system. (452 aa)    
Predicted Functional Partners:
GAT61707.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.993
GAT64159.1
NADH-quinone oxidoreductase subunit G.
    
 0.863
GAT61615.1
Nitrite reductase (NADH) large subunit.
    
 0.817
GAT61619.1
BFD-like [2Fe-2S] binding domain-containing protein.
    
 0.817
GAT61621.1
Nitrite reductase (NADH) large subunit.
    
 0.817
GAT64331.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
 0.799
GAT61788.1
ORF6N domain-containing protein.
       0.781
GAT64332.1
ABC-2 type transport system ATP-binding protein.
 
  
 
0.777
GAT62019.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
  0.763
GAT62020.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
  
 
  0.763
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.