STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT61915.1SpoIID/LytB domain protein. (436 aa)    
Predicted Functional Partners:
GAT61817.1
Glycosyl transferase family 2.
     0.977
GAT61816.1
Hypothetical protein.
     0.973
GAT63300.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 0.727
GAT61801.1
Hypothetical protein.
 
 
 0.724
GAT61815.1
MFS transporter, PAT family.
 
     0.721
GAT61916.1
Outer membrane protein assembly factor BamA.
 
     0.581
GAT63616.1
Hypothetical protein.
  
     0.491
GAT63932.1
Ig-like domain-containing protein.
  
     0.480
GAT61538.1
Hypothetical protein.
  
     0.467
GAT61917.1
PD-(D/E)XK nuclease superfamily protein.
       0.466
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.