STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_156Polygalacturonase. (507 aa)    
Predicted Functional Partners:
PJIAN_155
Rhamnogalacturonyl hydrolase YesR.
 
    0.803
PJIAN_154
Rhamnogalacturonyl hydrolase YesR.
 
 
   0.796
PJIAN_161
Lysophospholipase L1.
 
   0.731
PJIAN_153
Lysophospholipase L1.
 
 
   0.729
PJIAN_157
Hypothetical protein.
 
     0.666
GAT62001.1
Pectinesterase.
 
  
 0.658
PJIAN_158
Glycosyl hydrolases family 2.
 
 
  0.636
GAT61981.1
Pectinesterase.
 
 
   0.573
PJIAN_159
Hypothetical protein.
 
    0.548
PJIAN_160
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
   
0.541
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.