STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_158Glycosyl hydrolases family 2. (929 aa)    
Predicted Functional Partners:
PJIAN_161
Lysophospholipase L1.
  0.916
PJIAN_159
Hypothetical protein.
 
    0.868
PJIAN_157
Hypothetical protein.
 
    0.858
PJIAN_154
Rhamnogalacturonyl hydrolase YesR.
 
  0.856
PJIAN_155
Rhamnogalacturonyl hydrolase YesR.
 
    0.846
PJIAN_160
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
 
  0.818
PJIAN_153
Lysophospholipase L1.
 
  0.803
PJIAN_152
Beta-galactosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.769
PJIAN_162
Hypothetical protein.
 
     0.769
GAT64274.1
Starch-binding associating with outer membrane.
  
 
   0.750
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.