STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT62308.1Glycosyltransferase. (388 aa)    
Predicted Functional Partners:
GAT62303.1
Glycosyl transferase family 2.
 
     0.791
GAT62305.1
Glycosyltransferase sugar-binding region containing DXD motif-containing protein.
  
    0.782
GAT62304.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
    0.767
GAT62307.1
EpsG family protein.
  
    0.766
GAT62306.1
Glycosyltransferase.
       0.762
GAT62309.1
Glycosyltransferase.
 
  
 0.755
GAT62310.1
Polysaccharide transporter, PST family.
  
    0.614
GAT62311.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
  0.576
GAT62294.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
  
 0.517
GAT62295.1
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.517
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.