STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT62588.1Gliding motility-associated protein GldL. (280 aa)    
Predicted Functional Partners:
GAT62589.1
Gliding motility-associated protein GldM.
 
 
 
 0.992
GAT62587.1
Gliding motility-associated lipoprotein GldK.
 
   
 0.943
GAT62586.1
Type IX secretion system membrane protein, PorP/SprF family.
 
   
 0.939
GAT62590.1
Gliding motility associated protein GldN.
 
   
 0.861
GAT63829.1
Outer membrane protein beta-barrel domain-containing protein.
 
   
 0.812
GAT62637.1
Cell surface protein SprA.
  
   
 0.804
GAT62288.1
Hypothetical protein.
  
   
 0.790
GAT63371.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.783
PJIAN_138
Gliding motility-associated lipoprotein GldJ.
 
   
 0.782
PJIAN_263
Hypothetical protein.
  
     0.765
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.