STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT62627.1Hypothetical protein. (354 aa)    
Predicted Functional Partners:
GAT62626.1
Outer membrane cobalamin receptor protein.
 
    0.929
GAT63618.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
 
 
 0.801
GAT61589.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.766
GAT64138.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.752
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.747
GAT62887.1
NADPH-dependent 2,4-dienoyl-CoA reductase.
  
 
  0.746
GAT63104.1
IMP dehydrogenase.
    
  0.746
GAT61910.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
  0.706
GAT61620.1
Nitric oxide reductase subunit B.
   
 0.693
GAT64286.1
Hypothetical protein.
  
     0.531
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.