STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_226Nitrogen regulatory protein PII 1. (108 aa)    
Predicted Functional Partners:
PJIAN_228
Nitrogenase molybdenum-iron protein alpha chain.
 
 
 0.852
GAT61912.1
Ammonium transporter, Amt family.
  
 0.803
PJIAN_476
Ammonium transporter, Amt family.
  
 0.803
PJIAN_229
Nitrogenase molybdenum-iron protein beta chain; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.755
PJIAN_227
Nitrogen regulatory protein PII 2.
 
    
0.721
PJIAN_234
(2Fe-2S) ferredoxin.
 
     0.706
PJIAN_230
Nitrogenase molybdenum-cofactor synthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.704
PJIAN_231
Nitrogenase molybdenum-iron protein NifN; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.687
nifH
Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.669
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
    
 
 0.616
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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