STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_257Pyruvate dehydrogenase E2 component. (445 aa)    
Predicted Functional Partners:
PJIAN_254
2-oxoisovalerate dehydrogenase E1 component.
 
 0.999
PJIAN_488
2-oxoisovalerate dehydrogenase E1 component.
 
 0.999
PJIAN_256
Dihydrolipoamide dehydrogenase.
 0.989
GAT61656.1
Dihydrolipoamide dehydrogenase.
 0.964
PJIAN_491
Dihydrolipoamide dehydrogenase.
 0.964
GAT63870.1
Malate dehydrogenase.
  
 
 0.885
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.884
GAT61593.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.864
GAT61910.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 0.864
GAT63091.1
Ribose-phosphate pyrophosphokinase.
   
 0.844
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.