STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_288Haloacid dehalogenase superfamily, subfamily IA. (206 aa)    
Predicted Functional Partners:
GAT61821.1
D-lactate dehydrogenase.
    
 0.777
PJIAN_294
Phosphoglycolate phosphatase.
  
  
  0.776
GAT63618.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
 
  
  0.765
GAT63104.1
IMP dehydrogenase.
    
  0.744
hisB
Imidazoleglycerol-phosphate dehydratase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
    
 0.730
GAT62579.1
Phosphoglycolate phosphatase.
  
  
 
0.529
GAT63603.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.527
PJIAN_287
Tetratricopeptide repeat-containing protein.
       0.500
PJIAN_289
Hypothetical protein.
       0.467
PJIAN_286
SanA protein.
       0.438
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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