STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT62802.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
GAT63196.1
Hypothetical protein.
  
     0.759
GAT61862.1
Tetratricopeptide repeat-containing protein.
  
     0.752
PJIAN_141
Smr domain-containing protein.
  
     0.734
GAT63933.1
Cell division protein FtsQ.
  
     0.726
GAT62591.1
Putative porin.
  
     0.722
GAT63616.1
Hypothetical protein.
  
     0.717
GAT63176.1
Regulator of cell morphogenesis and NO signaling.
  
     0.704
GAT63381.1
Hypothetical protein.
  
     0.672
GAT61885.1
Outer membrane protein.
  
     0.658
PJIAN_325
Hypothetical protein.
  
     0.653
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.