STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT62806.1Calcineurin-like phosphoesterase. (320 aa)    
Predicted Functional Partners:
GAT63459.1
Two component regulator propeller.
    
 0.734
GAT63628.1
Two component regulator propeller.
    
 0.734
GAT64272.1
Signal transduction histidine kinase.
    
 0.734
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.678
GAT62820.1
Ankyrin repeat-containing protein.
    
 0.650
GAT63043.1
Tfp pilus assembly protein PilF.
 
 
  0.625
GAT63586.1
Signal transduction histidine kinase.
     
 0.617
GAT63436.1
AraC-type DNA-binding protein.
     
 0.482
GAT63573.1
Signal transduction histidine kinase.
     
 0.482
GAT64015.1
alpha-N-acetylglucosaminidase.
  
     0.457
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.