STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT62887.1NADPH-dependent 2,4-dienoyl-CoA reductase. (759 aa)    
Predicted Functional Partners:
GAT62886.1
Rhodanese-related sulfurtransferase.
 
0.963
GAT62680.1
Peroxiredoxin family protein.
     0.953
GAT62199.1
Hypothetical protein.
  
 0.937
GAT61589.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.880
GAT61821.1
D-lactate dehydrogenase.
  
 
 0.867
GAT64159.1
NADH-quinone oxidoreductase subunit G.
 
  
 0.850
GAT63059.1
Cysteine synthase A.
  
 
 0.844
GAT63086.1
Rhodanese-related sulfurtransferase.
 
0.842
GAT61932.1
Glutamine synthetase.
  
 
 0.841
GAT63702.1
Methionine-gamma-lyase.
  
 
 0.836
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.