STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT62959.1Indolepyruvate ferredoxin oxidoreductase beta subunit. (189 aa)    
Predicted Functional Partners:
GAT61910.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.999
GAT62958.1
Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 0.990
GAT63161.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
 
 0.831
GAT61589.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.806
GAT63870.1
Malate dehydrogenase.
    
 0.798
GAT61595.1
2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.786
GAT62960.1
acyl-CoA thioesterase.
 
     0.773
GAT61821.1
D-lactate dehydrogenase.
  
 
 0.750
GAT62654.1
methylmalonyl-CoA mutase.
     
 0.746
GAT62656.1
methylmalonyl-CoA mutase.
     
 0.746
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.