Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GAT62852.1 | GAT63216.1 | PJIAN_3163 | PJIAN_3532 | XTP/dITP diphosphohydrolase. | Nitrous oxide-stimulated promoter. | 0.545 |
| GAT63215.1 | GAT63216.1 | PJIAN_3531 | PJIAN_3532 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Nitrous oxide-stimulated promoter. | 0.768 |
| GAT63215.1 | GAT63217.1 | PJIAN_3531 | PJIAN_3533 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Glycosyltransferase. | 0.770 |
| GAT63215.1 | mfd | PJIAN_3531 | PJIAN_3530 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.558 |
| GAT63216.1 | GAT62852.1 | PJIAN_3532 | PJIAN_3163 | Nitrous oxide-stimulated promoter. | XTP/dITP diphosphohydrolase. | 0.545 |
| GAT63216.1 | GAT63215.1 | PJIAN_3532 | PJIAN_3531 | Nitrous oxide-stimulated promoter. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.768 |
| GAT63216.1 | GAT63217.1 | PJIAN_3532 | PJIAN_3533 | Nitrous oxide-stimulated promoter. | Glycosyltransferase. | 0.773 |
| GAT63216.1 | coaD | PJIAN_3532 | PJIAN_4606 | Nitrous oxide-stimulated promoter. | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | 0.621 |
| GAT63216.1 | mfd | PJIAN_3532 | PJIAN_3530 | Nitrous oxide-stimulated promoter. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.554 |
| GAT63216.1 | rnhB | PJIAN_3532 | PJIAN_4660 | Nitrous oxide-stimulated promoter. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.518 |
| GAT63217.1 | GAT63215.1 | PJIAN_3533 | PJIAN_3531 | Glycosyltransferase. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.770 |
| GAT63217.1 | GAT63216.1 | PJIAN_3533 | PJIAN_3532 | Glycosyltransferase. | Nitrous oxide-stimulated promoter. | 0.773 |
| GAT63217.1 | mfd | PJIAN_3533 | PJIAN_3530 | Glycosyltransferase. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.554 |
| coaD | GAT63216.1 | PJIAN_4606 | PJIAN_3532 | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. | Nitrous oxide-stimulated promoter. | 0.621 |
| mfd | GAT63215.1 | PJIAN_3530 | PJIAN_3531 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.558 |
| mfd | GAT63216.1 | PJIAN_3530 | PJIAN_3532 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Nitrous oxide-stimulated promoter. | 0.554 |
| mfd | GAT63217.1 | PJIAN_3530 | PJIAN_3533 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Glycosyltransferase. | 0.554 |
| rnhB | GAT63216.1 | PJIAN_4660 | PJIAN_3532 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Nitrous oxide-stimulated promoter. | 0.518 |