STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63218.1Glycosyltransferase. (367 aa)    
Predicted Functional Partners:
GAT63222.1
Membrane protein.
 
    0.732
GAT63220.1
Glycosyl transferase family 2.
 
     0.713
GAT63219.1
Glycosyl transferases group 1.
  
    0.630
GAT63223.1
UDP-GlcNAc3NAcA epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
    0.594
GAT63221.1
Hypothetical protein.
       0.590
GAT63224.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
    0.576
GAT62294.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
  
 0.458
GAT62295.1
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.458
PJIAN_116
1,4-alpha-glucan branching enzyme.
   
  0.456
GAT63225.1
Glycosyltransferase.
 
     0.454
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.