STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63225.1Glycosyltransferase. (431 aa)    
Predicted Functional Partners:
GAT63226.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
       0.773
GAT63223.1
UDP-GlcNAc3NAcA epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
    0.682
GAT63224.1
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
    0.679
GAT63222.1
Membrane protein.
 
    0.673
GAT63219.1
Glycosyl transferases group 1.
  
    0.490
GAT63220.1
Glycosyl transferase family 2.
       0.477
GAT63221.1
Hypothetical protein.
       0.477
GAT61682.1
Hypothetical protein.
 
     0.473
GAT61953.1
Exosortase.
  
     0.465
GAT62294.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
  
 0.458
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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