STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63249.1Membrane protein. (428 aa)    
Predicted Functional Partners:
GAT63251.1
Glycosyltransferase.
 
    0.952
GAT63253.1
Glycosyltransferase.
 
    0.945
GAT63254.1
Hypothetical protein.
 
     0.913
GAT63255.1
Glycosyltransferase.
 
    0.863
GAT63252.1
Maltose O-acetyltransferase.
 
    0.812
GAT63250.1
Hypothetical protein.
  
  
 0.800
GAT63257.1
Glycosyl transferases group 1.
 
    0.791
GAT63256.1
Glycosyltransferase.
 
    0.743
GAT61910.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.690
GAT63259.1
Glycosyltransferase.
 
    0.685
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.