STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63252.1Maltose O-acetyltransferase. (197 aa)    
Predicted Functional Partners:
GAT63251.1
Glycosyltransferase.
 
    0.814
GAT63249.1
Membrane protein.
 
    0.812
GAT63253.1
Glycosyltransferase.
 
    0.787
GAT63250.1
Hypothetical protein.
       0.763
GAT63256.1
Glycosyltransferase.
 
    0.719
GAT63254.1
Hypothetical protein.
 
     0.670
GAT63255.1
Glycosyltransferase.
 
    0.666
GAT63259.1
Glycosyltransferase.
 
    0.605
GAT63257.1
Glycosyl transferases group 1.
  
    0.558
GAT63258.1
Putative colanic acid biosynthesis acetyltransferase WcaF.
 
    
0.510
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.