STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_365acetyl-CoA decarbonylase. (343 aa)    
Predicted Functional Partners:
PJIAN_364
4Fe-4S dicluster domain-containing protein.
 
  
  0.965
GAT61910.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
 
 0.775
PJIAN_366
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.773
GAT64138.1
5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.772
GAT63870.1
Malate dehydrogenase.
     
 0.770
GAT62237.1
Vitamin B12 dependent methionine synthase.
   
 0.768
PJIAN_362
Arsenite transporter, ACR3 family.
       0.756
PJIAN_363
Amino-acid N-acetyltransferase.
       0.746
PJIAN_361
Phosphinothricin acetyltransferase.
       0.736
GAT61594.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
 0.731
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.