STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_367Hypothetical protein. (339 aa)    
Predicted Functional Partners:
PJIAN_370
Small redox-active disulfide protein 2.
 
  
 0.952
PJIAN_368
Cytochrome C biogenesis protein transmembrane region.
 
    0.808
PJIAN_371
DNA-binding transcriptional regulator, ArsR family.
  
  
 0.768
PJIAN_369
Hypothetical protein.
       0.763
PJIAN_366
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.734
PJIAN_362
Arsenite transporter, ACR3 family.
  
  
 0.719
GAT63590.1
Putative NADH-flavin reductase.
   
    0.680
PJIAN_364
4Fe-4S dicluster domain-containing protein.
       0.668
PJIAN_365
acetyl-CoA decarbonylase.
       0.668
PJIAN_363
Amino-acid N-acetyltransferase.
       0.651
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.