STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PJIAN_397Outer membrane protein. (171 aa)    
Predicted Functional Partners:
PJIAN_398
Outer membrane protein insertion porin family.
 
  
 0.920
GAT62797.1
Hypothetical protein.
 
 
   0.841
PJIAN_396
Outer membrane protein.
 
     0.808
GAT63742.1
Hypothetical protein.
  
    0.763
GAT61829.1
Peptidoglycan-associated lipoprotein.
  
   0.756
GAT62637.1
Cell surface protein SprA.
  
     0.742
GAT64204.1
Outer membrane protein assembly factor BamD.
 
   
 0.726
GAT61640.1
Hypothetical protein.
  
     0.722
GAT64086.1
Long-chain fatty acid transport protein.
  
     0.714
GAT62589.1
Gliding motility-associated protein GldM.
  
     0.704
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.