STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAT63573.1Signal transduction histidine kinase. (1372 aa)    
Predicted Functional Partners:
GAT63436.1
AraC-type DNA-binding protein.
 
0.998
GAT63459.1
Two component regulator propeller.
 
0.998
GAT63628.1
Two component regulator propeller.
 
0.998
GAT64272.1
Signal transduction histidine kinase.
 
0.998
GAT63586.1
Signal transduction histidine kinase.
 
0.950
GAT63289.1
PAS fold-containing protein.
   
 0.946
GAT62435.1
His Kinase A (phospho-acceptor) domain-containing protein.
0.927
GAT62193.1
Transposase zinc-ribbon domain-containing protein.
   
 0.915
PJIAN_266
Carbohydrate-binding family 9.
  
 0.911
PJIAN_254
2-oxoisovalerate dehydrogenase E1 component.
   
 0.898
Your Current Organism:
Paludibacter jiangxiensis
NCBI taxonomy Id: 681398
Other names: CGMCC 1.5150, JCM 17480, KCTC 5844, P. jiangxiensis, Paludibacter jiangxiensis Qiu et al. 2016, Porphyromonadaceae bacterium NM7, strain NM7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.